Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADRVLRGSRLGAVSYETDRNHDLAPRQIARYRTD-NGEEFEV-------------PFADDAEIPGTWLCR-NGMEGTLIEGDLPEPKKVKPPRTHWDMLLERRSIEELEELLKERLELIRSRRRG
1S24 Chain:A ((32-78))
---------------------------AYLKWICITCGHIYDEALGDEAEGFTPGTRF---EDIPDDWCCPDCGATK-------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1S24.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6355 for 134 contacts (-47.4/contact) +
2D Compatibility (PS) -3283 + (NN) -1001 + (LL) 5268
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -8121.0 ( -60.60 by residue)
QMean score : 0.110
(partial model without unconserved sides chains):
PDB file :
Tito_1S24.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S24-query.scw
PDB file :
Tito_Scwrl_1S24.pdb
: