Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQEQTKRGGGGGDDDDIAGSTAAGQERREKLTEETDDLLDEIDDVLEENAEDFVRAYVQKGGQ
3M9D Chain:G ((23-51))
----------------------AAGQERREKLTEETDDLLDEIDDVLEENA-------------
General information:
TITO was launched using:
RESULT:
Template:
3M9D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4086 for 111 contacts (36.8/contact) +
2D Compatibility (PS) -3252 + (NN) -1181 + (LL) 788
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -3409.0 ( -30.71 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_3M9D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M9D-query.scw
PDB file :
Tito_Scwrl_3M9D.pdb
: