Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGQIVAGEIGGQRTTPVGGGLPLACCLDGRPPIVPHRRRRRIAALRSVLRMRDTPRPARSRCDQVTSHAVLIGWRAVPRRHGGELPRRGALALGCIALLLMGIVGCTTVTDGTAMPDTNVAPAYRSSVSASVSASAATSSIRESQRQQSLTTKAIRTSCDALAATSKDAIDKVNAYVAAFNQ-GRNTG--PTEGPAIDALNNSASTVSGSLSAALSAQLGDALNAYVDAARAVANAIGAHASTAEFNRRVDRLNDTKTKALTMCVAAF
2L10 Chain:A ((1260-1354))
----------------------------------------------------------------------------------------------------------------------------------------------------------SRGTPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLL----------------AAKALSTDPASPNLKSQLAAAARAVTDSINQLITMCT---
General information:
TITO was launched using:
RESULT:
Template:
2L10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17406 for 570 contacts (-30.5/contact) +
2D Compatibility (PS) -9512 + (NN) 1000 + (LL) 10652
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -18016.0 ( -31.61 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2L10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L10-query.scw
PDB file :
Tito_Scwrl_2L10.pdb
: