Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANIKSQQKRNRTNERARLRNKAVKSSLRTAVRAFREAAHAGDKAKAAELLASTNRKLDKAASKGVIHKNQAANKKSALAQALNKL
2VQF Chain:T ((14-91))
--------KRHRQSLKRRLRNKAKKSAIKTLSKKAVQLAQEGKAEEALKIMRKAESLIDKAAKGSTLHKNAAARRKSRLMRKVRQL
General information:
TITO was launched using:
RESULT:
Template:
2VQF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2439 for 509 contacts (4.8/contact) +
2D Compatibility (PS) -8986 + (NN) -7702 + (LL) 752
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: -16897.0 ( -33.20 by residue)
QMean score : 0.781
(partial model without unconserved sides chains):
PDB file :
Tito_2VQF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQF-query.scw
PDB file :
Tito_Scwrl_2VQF.pdb
: