Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALRRRHEPDGWPFSQRSEKPNAVRHAVRCSAVSAAASTANGTPVNWVSGRVTRAMGVHRQTRGGVASVHADSLRGAVLVHGQLRNSIPISANVPASGANTKSSIAH
2LW3 Chain:A ((51-140))
--MHLTYEIFG---------PPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNI---VAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA---
General information:
TITO was launched using:
RESULT:
Template:
2LW3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3397 for 505 contacts (-6.7/contact) +
2D Compatibility (PS) -9515 + (NN) -2283 + (LL) 980
1D Compatibility (HY) -1200 + (ID) 850
Total energy: -16265.0 ( -32.21 by residue)
QMean score : 0.080
(partial model without unconserved sides chains):
PDB file :
Tito_2LW3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LW3-query.scw
PDB file :
Tito_Scwrl_2LW3.pdb
: