Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGV--IPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSY-------EQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLG-SYFWQHNWGSPK-GY-THPAAHLHQVEIDKRKVGGVG-----VDVNQILKPQFGQWA |
2WAG Chain:A ((12-208)) | ----------------------------------DRYEIKGVDVASYQGDIDWRELEKQNMKFAFIKATEGSA-----FVDKYFSKNWTNANKTSMRV-GAYHFFSFD----S----KGETQAEQFIRNVPK--YKQALPPVIDVEFYANKKDNPPKREDVTKELSVMIEMLEKH-YGKKVILYATQEAYDLYIKDAYPQCDIWIRSVLT-KPSLSDERKWTFWQYTNR-GKLSGYNGKEKYIDLNVFYG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53331 for 1394 contacts (-38.3/contact) +
2D Compatibility (PS) -18749 + (NN) -5138 + (LL) 3280
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -82188.0 ( -58.96 by residue)
QMean score : 0.447
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