Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEHVGKTCQIDVLIEEHDERTRAKARLSWAGRQMVGVGLARLDPADEPVAQIGDELAIARALSDLANQLFALTSSDIEASTHQPVTGLHH
1ZLH Chain:B ((1-74))
--------NECVSKGFGCLPQSDCPQEARLSYGGCSTVCCDLSKLTGCKGKGGECNP----------LDRQCKELQAESASCGKGQKCCVWL-
General information:
TITO was launched using:
RESULT:
Template:
1ZLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7106 for 500 contacts (14.2/contact) +
2D Compatibility (PS) -7276 + (NN) 786 + (LL) 1456
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -1378.0 ( -2.76 by residue)
QMean score : -0.006
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLH-query.scw
PDB file :
Tito_Scwrl_1ZLH.pdb
: