Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLD--PGLPLPSRAHDGDAGVDLYSA--EDVE--LAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
3MBQ Chain:A ((31-163))
---TLGIIRLEHAKGLDLPAYETAGSAGMDLRAAVAEDRQIVLLPGRRTLVPTGLILEIPQGYEVQIRPRSGLAFKNGITCLNTPGTIDSDYRGEVKVLLINLGD-DDFRIERGMRIAQAV-----FAPVIQPKIEERAKIS------------------
General information:
TITO was launched using:
RESULT:
Template:
3MBQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83873 for 812 contacts (-103.3/contact) +
2D Compatibility (PS) -14038 + (NN) -7580 + (LL) 396
1D Compatibility (HY) -9600 + (ID) 2900
Total energy: -117595.0 ( -144.82 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3MBQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MBQ-query.scw
PDB file :
Tito_Scwrl_3MBQ.pdb
: