Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISD-----NRRRASLAKILAGFGYRVQESAFEAMLTKGQLAKLVARIDRFAID-CDNIRIYKIRGVA--AVTFYGRGRLVSAEEFVFF
3OQ2 Chain:A ((5-102))
----------------------NDAMLVLISYDVSFEDPGGQRRLRRIAKACQDYGQRVQYSVFECVVDPAQWAKLKHRLLSEMDKEKDCLRFYYLGANWRNKVEHVGAKPAYDPEGPLI-
General information:
TITO was launched using:
RESULT:
Template:
3OQ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70440 for 573 contacts (-122.9/contact) +
2D Compatibility (PS) -9592 + (NN) -2683 + (LL) 1096
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -88569.0 ( -154.57 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3OQ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OQ2-query.scw
PDB file :
Tito_Scwrl_3OQ2.pdb
: