Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHSIVRTLLASGAATALIAIPTACSFSIGTSHSHSVSKAEVARQITAKMTDAAGNKPESVTCPSDLPAEVGAELNCEMKIKDRTFNVNVTVTSVDGSDVKFDMVETVDKNQVANIISDKLFQRVGARPDSVTCPDNLKGVEGAKLRCRLTDG--SKTYGISVIVTSVDAGDVNFDFKVDDHPE
4BHR Chain:A ((31-77))
--------------------------------------------------------------------------------------------------------------------------------QLPQACDQFVANPPASVTQCNVTANNDGVNFTVTAQLT---YGSVSF---------
General information:
TITO was launched using:
RESULT:
Template:
4BHR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10863 for 210 contacts (-51.7/contact) +
2D Compatibility (PS) -4698 + (NN) -4324 + (LL) 9120
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -12715.0 ( -60.55 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4BHR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BHR-query.scw
PDB file :
Tito_Scwrl_4BHR.pdb
: