Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTQATPLTPVISRHWDDPESWTLATYQRHDRYRGYQALQKALTMPPDDVISIVKDSGLRGRGGAGFATG--TKWSFIPQGDTGAAAKPHYLVVNADESEPGTCKDIPLMLATPHVLIEGVIIAAYAIRAHHAFVYVRGEVVPVLRRLHNAVAEAYAAGFLGRNIGGSGFDLELVVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLYGCPTVINNVETIASVPSIILGGIDWFRSMGSEKSPGFTLYSLSGH-VTRPGQYEAPLGITLRELLDYAGGVRAGHRLKFWTPGGSSTPLLTDEHLDVPLDYEGVGAAGSMLGTKALEIFDETTCVVRAVRRWTEFYKHESCGKCTPCREGTFWLDKIYERLETGRGSHEDIDKLLDISDSILGKSFCALGDGAASPVMSSIKHFRDEYLAHVEGGGCPFDPRDSMLVANGVDA |
4U9O Chain:A ((113-332)) | -----------------------------------------LASLNRDAIKTQLVESGLWT----AFRTRPFSKVPAI-D------STSEAIFVTAMDTNPLAAEPTVVINEQSEAFVAGLDVLSA-LTTGKVYVCKKGTSLPR---S----Q---------------QPNVEEHVF--DGPHP-------------------------------DHVAWSINYQDVIAVGQLFLTGELY----------TQRVVSLAGPVVNKPRLVRTVMGASLEQLVDSEIM----PGEVRIISGSVLSGTKATG-PHAYLGR----------YHLQVSVLREG--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134547 for 1578 contacts (-85.3/contact) +
2D Compatibility (PS) -21396 + (NN) -4718 + (LL) 11588
1D Compatibility (HY) -4800 + (ID) 1700
Total energy: -155573.0 ( -98.59 by residue)
QMean score : 0.280
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