Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYAATRNPLAIDV---SDPRVIPLQLDVTDAVSVAEAADLATDVGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASAFADRIAERS--GAIVNVSSVLAWLPLGMS--YGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
1PR9 Chain:A ((5-208))
---LAGRRVLVTGAGKGIGRGTV-QALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ---ATWSDPHK-AKTMLNRIPLGK------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1PR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82931 for 1506 contacts (-55.1/contact) +
2D Compatibility (PS) -21516 + (NN) -7705 + (LL) 3320
1D Compatibility (HY) -10800 + (ID) 3350
Total energy: -122982.0 ( -81.66 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1PR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR9-query.scw
PDB file :
Tito_Scwrl_1PR9.pdb
: