Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVR--QVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPL--VDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1EPZ Chain:A ((13-174))
---------GAIIIEPEVYTDERGYFMETFNEA---IFQENGLEVRFVQDNESMSVRGVLRGLHFQREKP-QGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDECIVNYKCTELYHPEYDSGIPWDDPDIGIDWPLEMVDDLIISEKDRN-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1EPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89056 for 1178 contacts (-75.6/contact) +
2D Compatibility (PS) -16944 + (NN) -7672 + (LL) 2884
1D Compatibility (HY) -13600 + (ID) 3600
Total energy: -127988.0 ( -108.65 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_1EPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EPZ-query.scw
PDB file :
Tito_Scwrl_1EPZ.pdb
: