Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
4M3G Chain:A ((22-214))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENP--TDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
4M3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98767 for 1373 contacts (-71.9/contact) +
2D Compatibility (PS) -21096 + (NN) -17527 + (LL) 1160
1D Compatibility (HY) -24800 + (ID) 9500
Total energy: -170530.0 ( -124.20 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_4M3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M3G-query.scw
PDB file :
Tito_Scwrl_4M3G.pdb
: