Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPIDAPILQMEVVRVDAEGVGLRFLSEA
1JB0 Chain:J ((1-41))
MKHFLTYLSTAPVLAAIWMTITAGILIEFNRFYPDLLFHPL-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1483 for 151 contacts (-9.8/contact) +
2D Compatibility (PS) -4158 + (NN) 1514 + (LL) 3164
1D Compatibility (HY) -800 + (ID) 350
Total energy: -2113.0 ( -13.99 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_1JB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JB0-query.scw
PDB file :
Tito_Scwrl_1JB0.pdb
: