Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQER--------EQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS
1TQG Chain:A ((3-71))
--------------------MEYLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMAKLCHTLENILDKARNSEIKITSDLLDKIFAGVDMITRMVDKIVS-------
General information:
TITO was launched using:
RESULT:
Template:
1TQG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10744 for 374 contacts (-28.7/contact) +
2D Compatibility (PS) -7057 + (NN) -6316 + (LL) 1864
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -25703.0 ( -68.72 by residue)
QMean score : 0.418
(partial model without unconserved sides chains):
PDB file :
Tito_1TQG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TQG-query.scw
PDB file :
Tito_Scwrl_1TQG.pdb
: