Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACA-LLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL |
| 4K6N Chain:A ((32-383)) | PNFEVLATFRYDPGFARQSA---SKKEIFETPDPRLGLRDEDIRQQIINEDYSSYLRVREVN-----SGGDLLENIQHPDAWKH----DCKTIVCQRVEDMLQVI--YERFF---LLDEQYQRIRIALSYFKI-------------DFSTSLNDLLKLLVENLINCKEGNSEYHEKIQKMINERQCYKMRVLVSK------TGDIRIEAIPMPMEPILKLTTDY-----DSVSTYFIKTMLNGFLIDSTINWDVVVSSEPLNASAFTSFKTTSR---DHYARARVRMQTAINNLRGSEPTSSVSQCEILFSN---KSGLLMEGSITNVAVIQKDPNG----------------------SKKYVTPRLATGCLCGTMRHYLLR----------------LGLIEEGDID-------IGSLTVG------------------NEVLLFNGVM-----------GCIKGTVKTKY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -293998 for 2631 contacts (-111.7/contact) +
2D Compatibility (PS) -34934 + (NN) 4922 + (LL) 8412
1D Compatibility (HY) -9600 + (ID) 3100
Total energy: -328298.0 ( -124.78 by residue)
QMean score : 0.190
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