Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLLLAGGLLVLSGCSLLMPTPDPNRAWVDLDTQPDADLAAVEVDDKSWDRTRYFEVDPGTRELTVRYQFTVDPTNIGPVDSPLWRDCQLNLKFKDFSAGQRYRLEAGHIGFRPWAKLYDQDNRELARGREGRCAKV |
| 2AP3 Chain:A ((3-13)) | -------MGIQRPTSTTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKKLTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKADNIDNDVKRKEVKQLDDVLKEKYKLHSDYAKAYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -542 for 29 contacts (-18.7/contact) +
2D Compatibility (PS) -1170 + (NN) 865 + (LL) 1032
1D Compatibility (HY) 1600 + (ID) 50
Total energy: 1735.0 ( 59.83 by residue)
QMean score : -0.349
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