Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIGP---PLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLYENR-------VFDGIPELLEALVGRGHTLY-VATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKE------ELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
2HCF Chain:A ((7-227))
----------VLFDIDGTLLKVESMNRRVLADALIEVYGTEGST----DFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETY--IALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP--FGAFADDALDRNELPHIALERARRMTGA-NYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI
General information:
TITO was launched using:
RESULT:
Template:
2HCF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114866 for 1550 contacts (-74.1/contact) +
2D Compatibility (PS) -22159 + (NN) -12395 + (LL) 1936
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -158884.0 ( -102.51 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2HCF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HCF-query.scw
PDB file :
Tito_Scwrl_2HCF.pdb
: