Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAELREAYEACLPELSAYSTELGQNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANY-AELSLAT-KMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLFAIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRVEHA-AASGINGVAWDAVELPSQFMENWCW-EPEGLALISAHYET--GVALPQDLLEKMLAAK----------NFQSGMMMVRQLEFSLFDFELHATHGDGRSVLQVLEGIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGV-F-----N---PDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA |
| 3HQ2 Chain:A ((11-492)) | -------------------------------------------------------FDLLKRISHYSEAVALMHWDSRTGAPKNGSEDRAESIGQLSTDIFNIQTSDRMKELIDVLYERF--DDLSEDTKKAVELAKKEYEE-NKK----------------------------------------------IPEAEYK---------------------------EYVILCSKAETAWEEAKGKSDF-------SLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEPGVTVKVLDQLFAELKEAIIPLVKQVT----ASGNK-P-------DTSF----------------ITKAFPKEKQKELSLYFL-QELGYDFDG-------------------------------GRLDETVHPFATTLNRG-----------DVRVTTRYDEKD-------FRTAIFGTIHECGHAIYEQNIDEALSGTNLSD-GASMGIHESQSLFYENFIGRNKHFWTPYYKKIQEASPVQFKDISLDDFVRAINESKPSFIRVEADELTYPLHIIIRYEIEKAIFSNEVSVEDLPSLWNQKYQDYLGITPQTDAEGILQDVHWAG-GDFGYFPSYALGYMYAAQLKQKMLEDLPEFDALLERGEFHPIKQWLTEKVHIHGKRKKPLDIIKDATGEELNVRYLIDYLSNKYSNL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150289 for 3728 contacts (-40.3/contact) +
2D Compatibility (PS) -49026 + (NN) -21603 + (LL) 15848
1D Compatibility (HY) -7200 + (ID) 2600
Total energy: -214870.0 ( -57.64 by residue)
QMean score : 0.391
|
|
|