Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVISRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLEVLLRFRHPLTIVTKGSLIL------RDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVGVLCSPMIPMV------NDMELERLLQAARDAGARSAAYMLLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 1QWG Chain:A ((38-168)) | ------------------------------------------------------------------------------------------------------------------------YIDFVKFGWGTSAVIDRD----VVKEKINYYKDWG--IKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSD----------I-SLEERNNAIKRAKDNGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIFEAPQKSQQVAFILKFGSSVNLANIAFDEVISLETLRRGLRGDTFGKV----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82632 for 856 contacts (-96.5/contact) +
2D Compatibility (PS) -13483 + (NN) -12164 + (LL) 7236
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: -105793.0 ( -123.59 by residue)
QMean score : 0.563
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