Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
| 4G1A Chain:A ((2-27)) | ------------------------------------------------------------------------------------------------------------------IAALEQKIAALEQKCAACEQKIAALE-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G1A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1615 for 96 contacts (16.8/contact) +
2D Compatibility (PS) -2863 + (NN) -1780 + (LL) 9444
1D Compatibility (HY) -1200 + (ID) 350
Total energy: 4866.0 ( 50.69 by residue)
QMean score : 0.216
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