Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGEAGQPSEPLNLLAGMAAAPWDYDFFQALRRIECESPQLPRLGHSVRLADDP--LRLGQKPDCTFAPSTLASVSQAGTAAVPRLDQFFFGLTGPNGPLPLHLTEYARERQRNVNDATFKRFMDVFHHRLLTLFYRAWAEARPEISHDRIDD--DYWSARLAALSGRGMPSLRGREPLADTARYYYTGHLAAQTRYPDGLRVILAEYFEVPVAVEEYVGQWLELPERSRLGVDSTSLGMDVCLGTHVWDRQHKFRLRLGPLDLDQYQRFLPDGDHFVELAAWVAEYLGEELDWDVNLVLQRHEVPPLGLQGGGRLGFNTWLGDPGQDARDLLLARQYATARPHEHKEKEHE |
| 4LT5 Chain:A ((63-327)) | -----INKKSLLQNLLSKCKTTFQQSFTNANITLK-DEKWLKNVRTAYFVCDHDGSVELAYLPNVLPKELVEEFTEKFESIQTGRKKDTGYSGILDNSMPFNYVTADLSQELGQYLSEIVNPQINYYISKLLTCVSSRTINYLVSLNDSYYALNNCLYPSTAFNSLKPSNDGHRIRKPHKDNLDITPSSLFYFGNFQNTEGYLELTDK-----------NCKVFVQPGDVLFFKGNEY---------------------------------------------------------------KHVVANI--TSGWRIGLVYFAHKGSKTKPYYEDTQKNSLKIHKETK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39816 for 2135 contacts (-18.6/contact) +
2D Compatibility (PS) -26863 + (NN) -6283 + (LL) 6764
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -70348.0 ( -32.95 by residue)
QMean score : 0.207
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