Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHVSKVFPSLRDTLPRDLMASVVVFLVALPLCMGIAIASGMPPAKGLLTGIVGGLVVGFLAGSPLQVSGPAAGLAVLVFELVRTYG-VAMLGPILLLAGAIQLLAGRLRLGCWFRVTSPAVVYGMLAGIGILIVLSQLHVMLDLAPKASGLDNLLAFPQAAFAALGSLGMDSGLDAALLGLGTIAVMWGWDKLRPQRLRFLPGALLGVSLATLASLWLALDVRRVEVPANLGEAIVWLRPADLLALADPSLLLAAVVVAFIASAETLLSAAAVDRLHDGPRSDMDRELSAQGVGNMLCGLLGALPMTGVIVRSSANVNAGARTRASAIFHGLWLLAFVLLLGSLLRQIPVASLAGVLVYTGVKLVDFKALGNLSRYGRMPMLVYAATALAIVFTDLLTGVLVGFALTLLKLVLKAARLKIALRYTGEHEAELRLSGAATFLKVPALSRVLDEVKPGTTLHVPMDNLSYVDHACMELLEDWGRMAPVQGSRLVIEPRALKRRLEGRLRGSVGLGGARNGGAVSPG |
| 1YT3 Chain:A ((1-375)) | MNYQMI-------TTDDALASLCEAVRAFP-------------------------------------------AIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLG------ITDWSPLKAILRDPSITKFLH------------AGSEDLEVF-LNVFGELPQPLIDTQILAAFCGR---PMSWGFASMVEEYS--------GVTLDKSESRTDWLARPLTERQCEYAAADVWY-----LLPITAKLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITN-----------------------------------AWQLRTRQLACLQLLADWRLRKARERDLAVNFV------VREEHLWSVARY--MP-----GSLGELDSLGLSGSEIRFHGKTLLALVEKAQTLP----------EDALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKIS------AELLASRRQINQLLNWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -316703 for 2943 contacts (-107.6/contact) +
2D Compatibility (PS) -39075 + (NN) -4551 + (LL) 8776
1D Compatibility (HY) -7600 + (ID) 4200
Total energy: -363353.0 ( -123.46 by residue)
QMean score : 0.250
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