Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
2OJO Chain:A ((1-22)) | -------------------------------------------FFHHIFRAIVHVAKTIHRLVTG------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1286 for 86 contacts (-15.0/contact) +
2D Compatibility (PS) -2290 + (NN) 265 + (LL) 11576
1D Compatibility (HY) -2800 + (ID) 350
Total energy: 5115.0 ( 59.48 by residue)
QMean score : -0.073
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