Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MLKVAIVLLLLATLVSLFSGL----FFLVKDQGHGSRVV-------NSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF-------------
2CZ4 Chain:A ((21-119))
DLVPLKLVTIVAESLLEKRLVEEVKRLGAKGYTITPARGEGSRGIRSVDWEGQNIRLETIVSEEVALRILQRLQEEYFPHYAVIAYVENVWVVRGEKYV
General information:
TITO was launched using:
RESULT:
Template:
2CZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65621 for 446 contacts (-147.1/contact) +
2D Compatibility (PS) -7325 + (NN) 115 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 500
Total energy: -76931.0 ( -172.49 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2CZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CZ4-query.scw
PDB file :
Tito_Scwrl_2CZ4.pdb
: