Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------MGGFMQYSQRLGEAGRNDRRSMRGAFRPGLLPTLVVLGLLPVLLWLGTW----QLQRADEKRALLASYEARRGAEPVSPGQLEGLRDPAYVR------VRLHGRFDERHTLLLDNRLRNGQAGVEVLQPFYDQA---SGLWLLVNRGWVAWTDRRSPPTLET-------PDRVLLLDAWTYLPPPGGLHLADA----PAGGWPRLVTQLDIPALWQAFGRAGLP------WEIRLEPGDASFDTDWPLVSMPPERHTGYAVQWFALATALLALYLYLGVRRAREKNHESRDSDA--------------------------- |
| 4P5F Chain:A ((8-374)) | LTPTEAAVLRELRLHRPQLPLDTLLFTDPNKDPDDVVTYTIAKQLQADGFLRLTDVVVTLGDADMRSQRAQLAKGVFDRL---ALPDVRVARGQDYPMTSTQAREHSKFLAEGAALRAAPDAVHTDGVRAMCERLATSPHKLGMVVIAGMTDASALLAEAGDLVREKVASITIMGGIDPARDADGLVQPDTRAYNNATDIHAARALYRRAQQLGIPLRILTKEAAYKAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIPGLDTAWFFRTFVAGALSFDAIWPQVTK---------LNLYDPLTLLAALPGTARLLFQPTPMHREGASPVEHVGHAEVVRPEKARLLLSALAKAALV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44952 for 1831 contacts (-24.6/contact) +
2D Compatibility (PS) -26007 + (NN) -764 + (LL) 644
1D Compatibility (HY) -2400 + (ID) 2750
Total energy: -76229.0 ( -41.63 by residue)
QMean score : 0.084
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