Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGFEARTQQGAALRPTSHFVYESIYTAILEKRLAPAAKLSKE-TLGQIFRVSNGTIQRALTRLAEDGAVVMPPKEVASVARPDERQARQVLDARLLVESEVVRQLPAGLDPAALAELRALVDEEQACLAARDSAGLIRLAGRFHLRLAELTENPLLQGFVRGLVARASLDIALNKGAVYTAEACAAQRALLDALEDGDSAAAAALMDAYLRGLFARMRFLPPPTTDLREAFGMKAPSGEKRRRA |
4P9U Chain:E ((10-87)) | -------------------YIIESIWNG----RFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNQFMETSGLHILDTLMTLDAENATSIVEDLLAARTNISPIFMRYAFKLNKESAERIMINVIESCEALVNAPSWDAFIAASPYAEKIQQHVKEDSEKDELKRQEILIAKTFNFYDYMLFQRLAFHSGNQIYGLIFNGLKKLYDRVGSYYFSNPQARELAMEFYRQL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41783 for 483 contacts (-86.5/contact) +
2D Compatibility (PS) -8124 + (NN) -1630 + (LL) 1868
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -57919.0 ( -119.92 by residue)
QMean score : 0.414
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