Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTRVLRGLVAALPLFLAACSDSAPSSEEIARLLAERGFDKPACASSTLFKTFPVTLSDSFSGPGPAKGNAAVYDALVGVGLLRRDG---------DSYDLTPAGREDYKPESKAFCYSSGFDVSVRSVDPAKPDDYGPAVEKGWLVTVEVKPREVKDWAKNPEVLKQASLTTLQQITQPQVGQVSLVKPRGEEGYKLVNTRFSPRQGFHFNQAW |
3L9F Chain:A ((71-116)) | ------------------------------------------------------------------YGMIYPTLRKLEKDGKITKEVVIQDGRPNKNIYAITESGKKELASYLQSDVNDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKGELTPTQEITIKYGLAQYKSTKKVLEEELAK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2717 for 181 contacts (-15.0/contact) +
2D Compatibility (PS) -3537 + (NN) 1431 + (LL) 4284
1D Compatibility (HY) -800 + (ID) 250
Total energy: -1589.0 ( -8.78 by residue)
QMean score : 0.353
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