Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLG---QEGMMLFGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAAL--FAGVALYLNANQVACGLALTIFGVGLASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLLRSRAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMTAGRGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYAATILVLVLLSRDALRTRLYAPVSLGQPWKAGH
2FGZ Chain:A ((955-1069))
-------------LRKSSPLFTLGDGATVMKRVDFRNTGADQQTGLLVMTIDDGMQAGASLDSRVDGIVVAINAAPESRTLQDFAGTSLQLSAIQQAAGDRSLASGVQVAA---DGSVTLPAWSVAVLELPQGESQGAGLPVSSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2FGZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91668 for 762 contacts (-120.3/contact) +
2D Compatibility (PS) -11055 + (NN) 6871 + (LL) 17744
1D Compatibility (HY) -400 + (ID) 1750
Total energy: -80258.0 ( -105.33 by residue)
QMean score : 0.005
(partial model without unconserved sides chains):
PDB file :
Tito_2FGZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FGZ-query.scw
PDB file :
Tito_Scwrl_2FGZ.pdb
: