Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALQVASAPHGSSEDSTSASLPANYPYHTRMRRNEYEKAKHDLQIELLKVQSWVKETGQRVVVLFEGRDAAGKGGTIKRFMEHLNPRGARIVALEKPSS---QEQG----------QWY-------FQRY-----IQHLPTAGEMVFFDRSWYNRAGVERVMGFCSPLQYLEFMRQAPELERMLTNSGILLFKYWFSVSREEQLRRFISRRDDPLKHWKLSPIDIKSLDKWDDYTAAKQAMFFHTD-TADAPWTVIKSDDKKRARLNCIRHFLHSLDYPDKDRRIAHEPDPLLVGPASRVIEEDEKVYAEAAAAPGHANLDIPA |
| 3TMK Chain:A ((2-206)) | --------------------------------------------------------MGRGKLILIEGLDRTGKTTQCNILYKKLQPN-CKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDLLEGKNIVMDRYVYSGVAYSAAKGTN-G----MDLDWCLQPDVGL---LKPDLTLFLSTQDVDNNAEKSGFGDER----------YETVKFQEKVKQTFMKLLDKEIRKGDESITIVDVTNKGI--QEVEALIWQIVEPVLSTHIDHDKFSFF-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33144 for 1320 contacts (-25.1/contact) +
2D Compatibility (PS) -19014 + (NN) -9876 + (LL) 7728
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -60256.0 ( -45.65 by residue)
QMean score : 0.352
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