Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYEWLNALPKAELHLHLEGTLEPELLFALAERNRIALPWNDVETLRKAYAFN---NLQEFLDLY-YAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGI-------------PFEVVLAGIRAALRDGEKLLGIRHGLILSFLRHLSEEQAQKTLDQALPFRD-AFIAVGLDSSEVGHPPSKF----QRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTILDMLERGVKVTVNSDDPAYFGGYVTENFHALQQSLGMTEEQARRLAQNSLDARLVK |
| 3IAR Chain:A ((7-326)) | --------PKVELHVHLDGSIKPETILYYGRRRGIALPANTAEGLLNVIGMDKPLTLPDFLAKFDYYMPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVV-ALVGQGLQEGERDFGVKARSILCCMRH-QPNWSPKVVELCKKYQQQTVVAIDLAGDET-IPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQALYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKSSFLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142812 for 2671 contacts (-53.5/contact) +
2D Compatibility (PS) -32336 + (NN) -17554 + (LL) 1156
1D Compatibility (HY) -19600 + (ID) 4250
Total energy: -215396.0 ( -80.64 by residue)
QMean score : 0.514
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