Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
3U6U Chain:A ((2-34))
------------------------------------------------------------------------------------------------IVVKVGGAEGINYEAVAKDAASLWKEGVKLLLVHGGS
General information:
TITO was launched using:
RESULT:
Template:
3U6U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10226 for 143 contacts (-71.5/contact) +
2D Compatibility (PS) -3470 + (NN) 243 + (LL) 7168
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -10535.0 ( -73.67 by residue)
QMean score : 0.786
(partial model without unconserved sides chains):
PDB file :
Tito_3U6U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U6U-query.scw
PDB file :
Tito_Scwrl_3U6U.pdb
: