Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSRKINKSRLALAITAGTLGALAQQAVAAGFIEDSKASLTLRNFYINTDNRNGTASPSKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRLDGGGRAGKSGLDRQPGTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPG-VLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTARG--------------DQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSGLPAAGSSNNQRDQDENRLIVSYTLPLL |
| 2ODJ Chain:A ((4-420)) | ----------------------VSDQAEAKGFIEDSSLDLLLRNYYFNRDGK--------RVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT--------------------------DYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTE-----------ELYATYAGETAKSAD-----FIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGK--------------------AKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFG-----SIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHR-----ANADQGEGDQNEFRLIVDYPLSIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ODJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10736 for 2839 contacts (3.8/contact) +
2D Compatibility (PS) -36515 + (NN) -3358 + (LL) 880
1D Compatibility (HY) -26400 + (ID) 6700
Total energy: -61357.0 ( -21.61 by residue)
QMean score : 0.262
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