Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFFLRYAYAPLFWSGFIGLATWQVGYRQASHAWLVALFLGALGLSFLAERRLPYQPRWNRPHADRLRDVLHASVNESLNALGILALPLLAGVLGFWPVWPQAWPLWLQLLLAIVLADLGITLVHYASHRSALLWRLHAVHHSVQRLYGFNGLMKHPLHLGLEALGGTLPLLLLGVPQTVAALLAFAIGIQLLLQHSNVDMRIGGLRHVFAWAPLHRLHHIRYGRAGDVNFALFFSVWDRLLGTALHRPDYRLDSTDMGIGDQPDYPRDYAGQLLAPFRDLPRSRHVPQPPEGLGRSAGQA |
| 3J6V Chain:J ((1-201)) | MA--VRAVFGALGRRLWQGSKNFSVSSSR-SNIAKNDGFLLSTSMKWV---------QFSNLHVDVPKDLTKPTITIS-DEPDTLYKRLSVLVKGH----DKAVLDSYEYFAVLAAKELGISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQR-----------------------------------------------------------NLPEGVAMEVTKTRLE--------------QLPEHIKKPVWE--------TTPEEKGDSKS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98271 for 1356 contacts (-72.5/contact) +
2D Compatibility (PS) -20213 + (NN) 2874 + (LL) 7344
1D Compatibility (HY) -400 + (ID) 1950
Total energy: -110616.0 ( -81.58 by residue)
QMean score : 0.031
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