Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
3KWL Chain:A ((57-90))
----NQIAVFE-----DAKVSDLVAFF-SKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTERD
General information:
TITO was launched using:
RESULT:
Template:
3KWL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2318 for 132 contacts (-17.6/contact) +
2D Compatibility (PS) -3800 + (NN) -3215 + (LL) 860
1D Compatibility (HY) -2800 + (ID) 200
Total energy: -11473.0 ( -86.92 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_3KWL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KWL-query.scw
PDB file :
Tito_Scwrl_3KWL.pdb
: