Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQRIRIIDSHTGGEPTRLVIGGFPDLGQGDMAERRRLLGERHDAWRAACILEPRGSDVLVGALLCAPVDPEACAGVIFFNNSGYLGMCGHGTIGLVASLAHLGRIGP------GVHRIETPVGEVEATLHED-G------SVSVRNVPAYRYRRQVSVEVPG-IGRVSGDIAWGGNWFFLVAGH--GQRLAGDNLDALTAYTVAVQQALD----DQDIRGEDGGAIDHIELFADD--PHADSRNFVLCPGKAY-DRSPCGTGTSAKLACLAADGKLLPGQPWRQASVIGSQFEGRYEWLDGQP-------------GGPIVPTIRGRAHVSAEATLLLADDDPFAWGIRR |
| 1W61 Chain:A ((44-390)) | -KSFTCIDMHTEGEAARIVTSGLPHIPGSNMAEKKAYLQENMDYLRRGIMLEPRGHDDMFGAFLFDPIEEGADLGIVFMDTGGYLNMCGHNSIAAVTAAVETGIVSVPAKATNVPVVLDTPAGLVRGTAHLQSGTESEVSNASIINVPSFLYQQDVVVVLPKPYGEVRVDIAFGGNFFAIVPAEQLGIDISVQNLSRLQEAGELLRTEINRSVKVQHPQLPHINTVDCVEIYGPPTNPEANYKNVV-IFGNRQADRSPCGTGTSAKMATLYAKGQLRIGETFVYESILGSLFQGRVLGEERIPGVKVPVTKDAEEGMLVVTAEITGKAFIMGFNTMLFDPTDPFKNGFTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W61.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176415 for 2815 contacts (-62.7/contact) +
2D Compatibility (PS) -33332 + (NN) -12439 + (LL) 384
1D Compatibility (HY) -22400 + (ID) 5550
Total energy: -249752.0 ( -88.72 by residue)
QMean score : 0.564
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