Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKPTVRVLALLELLQS---HGQLSGSELARRLEVDGRTLRRYIVALEELGIPISAERGRHGGYRLVAGFKLPPLMFSAEETLAVSLGLLAVRSLGLGESELALESAQAKLSRVMPVALRRRLVALRETASLDLARARAGTSVAALATLAEAAQVRARVEFRYRDPQGAETLRQLDPYGLAYRNGCWYVSGFCHLRQALRSFRLDRLDAPRMLAERFERPADFDTLRHLRESFARMPRAYPVEILMRAAREQVVAVLGEPLGLLAEVDGGTLLRASTDDLDWFARRLCGLPFDFEVRQPLELREPLRRQAERVLRNLGQEEASDHR |
1QBJ Chain:A ((10-70)) | -----DQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGK-LQKEAGTPPLWKIA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44162 for 379 contacts (-116.5/contact) +
2D Compatibility (PS) -6103 + (NN) -2180 + (LL) 21308
1D Compatibility (HY) -2400 + (ID) 450
Total energy: -33987.0 ( -89.68 by residue)
QMean score : 0.735
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