Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDITQAAIVTGASRGIGRAIARRLAADGFAVAVNYASNQAMADEVVAEIVAAGGAAIAVQGDVASAEDMDKLFEATRGAFGRIDVVVNSAGTMPYLKIADGDLEGFDRVIRTNLRGAFIVLGLAARHV--ERGGRIIALSTSVIARALPSYGPYIASKSGVEGLVHVLANELRGQDIRVNAVAPGPVATELFFNGKSAEQIDQIARLAPLERLGEPDEIAAAVSFLAGPDGAWVNSQVLRVNGGFA
3OSU Chain:A ((4-243))
----TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM-TDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMY
General information:
TITO was launched using:
RESULT:
Template:
3OSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153926 for 2067 contacts (-74.5/contact) +
2D Compatibility (PS) -25755 + (NN) -8204 + (LL) 328
1D Compatibility (HY) -15600 + (ID) 4850
Total energy: -208007.0 ( -100.63 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_3OSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSU-query.scw
PDB file :
Tito_Scwrl_3OSU.pdb
: