Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA------GGQRVSLWSEVEHEFR
1YDH Chain:A ((100-143))---------------------------------------------------------------------AAMAQEAEAFIAL--PGG---YGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNN


General information:
TITO was launched using:
RESULT:

Template: 1YDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13831 for 181 contacts (-76.4/contact) +
2D Compatibility (PS) -4316 + (NN) -2382 + (LL) 6380
1D Compatibility (HY) -800 + (ID) 500
Total energy: -15449.0 ( -85.35 by residue)
QMean score : 0.349

(partial model without unconserved sides chains):
PDB file : Tito_1YDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YDH-query.scw
PDB file : Tito_Scwrl_1YDH.pdb: