Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYGPSELTGAVIALLEKRWVGVAEVQALLEPLPLADVARQIHFFRELKRLYRLLPVEVFGDDEQR-QNLLNACQMALDLAIEREEEQQHGLG
2F1B Chain:A ((448-507))
-------------------WDGMARIEERLE-----QARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYS
General information:
TITO was launched using:
RESULT:
Template:
2F1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14460 for 325 contacts (-44.5/contact) +
2D Compatibility (PS) -6249 + (NN) -2840 + (LL) 1784
1D Compatibility (HY) -2000 + (ID) 950
Total energy: -24715.0 ( -76.05 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_2F1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F1B-query.scw
PDB file :
Tito_Scwrl_2F1B.pdb
: