Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRTVEDVDMLNHHFRVCSATVYRPPGDGCQSATSQPSAWWMAA--KESRSGQLRRVEHVAFEGHPAAVLAGRAVEDRAVVGEADG-QAEADVGSVLRGVQLAFEVQLEHARLDAFQADGDVRVVHGLAFAAALLGADGEGHGVSVHVLLQLAWGRRRQRGGQTTGRRAGWPVLAAVGAARGLGIIRRRRSPTAHHQPTPEGMMKLPVLAVLGAALLLSACAKKEAEACASPDVKDQLMRIFLQGAITERSPEFKDSALRDVAILEKDPDSGVLSCVGTLSVPAGQQVVEGVLQYRIAPVAKSDYDYLLLDTAGANTTALAQRLNKALGQ |
2WTM Chain:A ((2-251)) | ------GAMYIDCDGIKLNAYLDMPKN----NPEKCPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRA-----DMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDF-----VTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLG----------------------------LKFDPENIPD---ELDAWDGRKLK---GNYVRVAQTIRVEDFVDKYT-----------------KPVLIVHGDQDEAV-------PYEASVAFSKQYKNCKLVTIPGDTH--CYDHHLELVTEAVKEFMLEQIAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74405 for 2175 contacts (-34.2/contact) +
2D Compatibility (PS) -26889 + (NN) -10547 + (LL) 5256
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -112185.0 ( -51.58 by residue)
QMean score : 0.349
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