Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYQRLKGFTDN---LELRRRNRATVEHYMRMKGAERLQRHSLFVEDGCAGNWTTESGEPLVFRGHESLRRLAEWLERCFPDWEWHNVRIFETEDPNHFWVECDGRGKALVPGYPQGYCENHYIHSFELENGRIKRNREFMNPMQKLRALGIAVPQIKRDGIPT
3JUO Chain:B ((28-184))
-------ENTSENRAQVAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLP-
General information:
TITO was launched using:
RESULT:
Template:
3JUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31357 for 987 contacts (-31.8/contact) +
2D Compatibility (PS) -16756 + (NN) -7203 + (LL) 952
1D Compatibility (HY) -13600 + (ID) 4100
Total energy: -72064.0 ( -73.01 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3JUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUO-query.scw
PDB file :
Tito_Scwrl_3JUO.pdb
: