Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNAMALTLAGLLAAPSLGFAAAPDAVMVFARQGDKGSVSVGDKHFRTQAFKVRLVNAAKSEISLK--N---SCLVAQSAAGQSFRL---D-TVDEELTADTLKPGASVEGDAIFASEDDAVYGASLVRLSDRCK
3ISY Chain:A ((19-81))
-----------------------------------------------QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVTFKGRAE
General information:
TITO was launched using:
RESULT:
Template:
3ISY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4010 for 210 contacts (-19.1/contact) +
2D Compatibility (PS) -5632 + (NN) 1324 + (LL) 3184
1D Compatibility (HY) -2800 + (ID) 450
Total energy: -8384.0 ( -39.92 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3ISY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ISY-query.scw
PDB file :
Tito_Scwrl_3ISY.pdb
: