Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGMRTVLTGLAGMLLGSMMPVQADMPRPTGLAADIRWTAYGVPHIRAKDERGLGYGIGYAYARDNACLLAEEIVTARGERARYFGSEGKSSAELDNLPSDIFYAWL---NQPEALQAFWQAQTPAVRQLLEGYAAGFNRFLREADGKTTSCLGQPWLRAIATDDLLRLTRRLLVEGGVGQFADALVAAAPPGAEKVALSGEQAFQVAEQRRQRFRLERGSNAIAVGSERSADGKGMLLANPHFPW-NGAMRFYQMHLTIPGRLDVMGASLPGLPVVNIGFSRHLAWTHTVDTSSHFTLYRLALDPKDPRRYLVDGRSLPLEEKSVAIEVRGADGKLSRVEHKVYQSIYGPLVVWPGKLDWNRSEAYALRDANLENTRVLQQWYSINQASDVADLRRRVEALQGIPWVNTLAADEQGNALYMNQSVVPYLKPELIPACAIPQLVAEGLPALQGQDSRCAWSRDPAAAQAGITPAAQLPVLLRR--DFVQNSNDSAWLTNPASPL----QGFSPLVSQEKPIGPRARYALSRLQGKQPLEAKTLEEMVTANHVFSADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAELDGA----WKEPFDAQRPLDTPQGIALDRPQVATQVRQALADAAAEVEKSGIPDGARWGDLQVSTRGQERIAIPGGDGH-----FGVYNAIQSVRKGDHLEVVGGTSYIQLVTFPEEGPKARGLLAFSQSSDPRSPHYRDQTELFSRQQWQTLPFSDRQIDADPQLQRLSIRE |
| 4E56 Chain:A ((11-673)) | -------------------PIAAYKPR----SNEILWDGYGVPHIYGVDAPSAFYGYGWAQARSHGDNILRLYGEARGKGAEYWGPDYEQTT-----------VWLLTNGVPERAQQWYAQQSPDFRANLDAFAAGINAYAQQNPDDISPEVRQ--VLPVSGADVVAHAHRLM----------NFL-------------------------------GGANSWAVAPGKTANGNALLLQNPHLSWTTDYFTYYEAHLVTPD-FEIYGATQIGLPVIRFAFNQRMGITNTVNGMVGATNYRLTLQDGG---YLYDGQVRPFERRQASYRLRQADGTTVDKPLEIRSSVHGPV------FERADGTAVAVRVAGLDRPGMLEQYFDMITADSFDDYEAALARMQ-VPTFNIVYADREGTINYSFNGVAPKRAEGDI-------AFWQGL--VPGDSSRYLWTE--------THPLDDLPRVTNPPGGFVQNSNDPPW--TPTWPVTYTPKDFPSYLAPQTPHSLRAQQSVRLMSENDDLTLERFMALQLSHRAVMADRTLPDLIPAALIDP-DPEVQAAARLLAAWDREFTSDSRAALL-FEEWARLFAGQNFAGQAGFATPWSLDKPVSTPYGVR-DPKAAVDQLRTAIANTKRKYGAIDRPFG------DASRMILNDVNVPGAAGYGNLGSFRVFTWSDPDENGVRTPVHGET-WVAMIEF-STPVRAYGLMSYGNSRQPGTTHYSDQIERVSRADFRELLLRREQVEA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190604 for 5530 contacts (-34.5/contact) +
2D Compatibility (PS) -67512 + (NN) -28390 + (LL) 7312
1D Compatibility (HY) -35600 + (ID) 9250
Total energy: -324044.0 ( -58.60 by residue)
QMean score : 0.458
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