Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDADKLRVCQVSNGSETFQVVCGAPNVRAGLKIPFAMIGAELPD-DFKIKKAKLRGVESFGMLCSAKELQISEENAGLLELPADA-PVGQDVRTYLELADYTIEVGLTPNRGDCLSLAGLAREVSAIYDVPLAPVAVDAVAAQHDETRPVELAA----PAACPRYLGRVIRNVDLSRPTPLWMVERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEITLRADTLVIA----DHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVA-PITLRAERVTQMLGMPLDAAEIVRLLQALELTVVADGEG-QWSVGVPSHRFDISLEVDLIEELARLYGYNRLPVRYPQARLAPNN-------KPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPLTLANPISADMAAMRSSLWPGLVKALQHNLNRQQ-SRVRLFESGLRFVGQLEGLKQEAMLAGAICGKRLPEGWANGRDGVDFFDAKADVEAVLASAGALGDFSFVPGEHPALHPGQTARIEREGRLVGYLGALHPELAKKLDLEQPVFLFELLLAEVVDGHLPKFRELSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLRK |
| 4TVA Chain:B ((1-775)) | MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVL--EAHPIPGTRLKRLVLDAGRTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALSPRELGVGEYGGGLLEFPEDALPPGTPLSEAWP-EEVVLDLEVTPNRPDALGLLGLARDLHA-----LGYALVEPEAALKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVA-PSPLWMQRALFAAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHPEDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTEASHRFERGVDPLGQVPAQRRALSLLQALAGAR---VAEALLEAGSPKPPEAIPFRPEYANRLLGTSYPEAEQIAILKRLGCRV--EGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLALPAFFPAPDNRGVEAPYRKEQR-----LREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFE-----VGRVFREREETHLAGLLFGEGVGLPWAKERLS-GYFLLKGYLEALFARLGL--AFRVEAQAFPFLHPGVSGRVLVEGEEVGFLGALHPEIAQELEL-PPVHLFELRLP-LPDKPL-AFQDPSRHPAAFRDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFRHPKRTLRDEEVEEAVSRVAEALRAR------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -384158 for 5994 contacts (-64.1/contact) +
2D Compatibility (PS) -80384 + (NN) -15256 + (LL) 2016
1D Compatibility (HY) -52800 + (ID) 15250
Total energy: -545832.0 ( -91.06 by residue)
QMean score : 0.434
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