Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLPIPSLLIAGIGCRRGCSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLLERPVHFLAPAVLHDYEPRLLSPSAVALRETGCSSVAEAAALALAERLGGGRADLLGAKRSDDRASIALARLLTERELP
2Y0D Chain:B ((267-310))
-------FLYAGCGYGGSCFPKDVEALI-RTADEHGQSLQILKAVSSVNATQ------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Y0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9629 for 199 contacts (-48.4/contact) +
2D Compatibility (PS) -4888 + (NN) -3993 + (LL) 6808
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -17352.0 ( -87.20 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2Y0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y0D-query.scw
PDB file :
Tito_Scwrl_2Y0D.pdb
: