Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAHKDFTLAPRASGSVSWVETLVISALALGLGWWFSPDDPLQVNATFPWVILAPLLLGMRYGFVRGLASAALLVAALFAFRARGVEAYAQVPAAFIVGVLLCAMLVGEFRDIWERRLERLELANEYRQLRLDEFTRAHHILRISHDRLEQRVAGNDQSLRSSLLGLRQLLRELPGDEAPLDALAETVLALLAQYGSLRIAGLYRVRYDRTPEPQPLATLGEM--PALDADDLLVRTCLERGELVSVRQELLERG--EQRAHSALQVCVPLVDTDGRILALLAVEQMPFFVFNERTFSLLAILAGHIADLLQSDRRALQLADIDAQRFSQYLKRSLLDARDHGLPACLYAFELTDARYGEEVQRLLEGSQRGLDVQLRLRNDEGRRVLLVLLPLTSAEGSQGYLQRLRILFAERFGQARELESLGVRIRQYELDAGNDRQALGHFLFNECGLNDQQVAI |
| 3MMH Chain:A ((17-165)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------EVLPQIESVVADETDWV-ANLANTAAVLKEAFGWFWVGFYLVDTRS-DELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDAHPDHIACSSLSRSEIVVPLFS-DGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRFEASRQ----------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115514 for 1116 contacts (-103.5/contact) +
2D Compatibility (PS) -15723 + (NN) -7674 + (LL) 25384
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -119677.0 ( -107.24 by residue)
QMean score : 0.432
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