Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLTELLDELRHPAVRDLAWTLLAPPLLRRTPEPQRHPLAASRWRQEPERLAAWLREQERQPQHLAAWLAQWPRQRLGLYYEHLWQFALEQAPDVRLIAANLPVRDGGHTLGELDLLLRDDDGIHHLELAIKLYLGPQSGPGDWLGPGGQDRLSRKLEHLCRHQLPLAATREGRQVLAAHGAESAVSALWLSGYLFHPWPGPGSLPADIEPRHLRGRWLRQRDWPAYLASLAGPQTGQHWLHLSREHWLAPAMRRQDPLDPPRDGACWNIAFADEARPQMLVRVVPRDGYWVEAERLFLASDDWPPGLSLWGSARQAADA |
| 1GEF Chain:A ((2-47)) | ---------------------------------------------------------------------------YRKGAQAERELIKLLEKH-GFAVVRSA--------GSKKVDLVAGNGKKYLCIEV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14604 for 253 contacts (-57.7/contact) +
2D Compatibility (PS) -5112 + (NN) -2139 + (LL) 16784
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -6671.0 ( -26.37 by residue)
QMean score : 0.232
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