Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWFRNLLVYRLTQDLQLDADSLEKALGEKSARPCASQELTTYGFTAPFGKGPDAPLVHVSQDFFLISARKEERILPGSVVRDALKEKVDEIEAQQMRKVYKKER-DQLKDEIVQTLLPRAFIRR-SSTFAAIAPSLGLILVDSASAKKAEDLLSTLREALGSLPVRPLSVKVAPTATLTDWVKTQEAAGDFHVLDECELRDTHEDGGVVRCKRQDLTSEEIQLHLTAGKLVT-QLSLAWSDKLSFVLDDKLAVKRLRFEDLLQEQAEKDGGEDALGQLDASFTLMMLTFAEFLPALFEALGGEEIPQGV |
| 2IGS Chain:A ((6-219)) | --------INIYQNPGQSLANIYKGFARQC----------NPGFVFP---------EAQTIEAWDIPLRLHPEFIPGGDISKADQQYSTLLAQEIANGVTIGFRMVNEKERVCNVEI-LPLLTSMAQNLDRIKARFGS---------------GYLDRFKGSPNVYPTDVGFSTDAS----------------------GGISQESGLLVSYGVNLRT------LTPGTWQAMTLPEDIKALVGPGVGLRL---------------DAPNFSDVFNTIKSGLR--YTTAVTLLLAYFAAIGS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34418 for 1642 contacts (-21.0/contact) +
2D Compatibility (PS) -22538 + (NN) -7111 + (LL) 7956
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -65111.0 ( -39.65 by residue)
QMean score : 0.404
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